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Dataset Information
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Dataset Name:
L1000 Dataset -small molecule, CRISPR perturbagens- LINCS Phase 2 (December 2015)

Dataset Description:
Transcriptional profiles of multiple cell and perturbation types: 23 cells are treated with 311 chemical perturbagens and CRISPR reagents. The expression level for 978 representative genes is measured.

--Data Files in Package:
GSE70138_Broad_LINCS_Level2_GEX_n113012x978_2015-12-31.gct.gz

--Metadata Files In Package:
Differentiated_Cell_Metadata.txt
Primary_Cell_Metadata.txt
Cell_Line_Metadata.txt

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Center-specific Information
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Center-specific Name:
BroadT

Center-specific Dataset ID:
LDS-1291

Center-specific Dataset Link:


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Assay Information
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Assay Protocol:

Date Updated:

Date Retrieved from Center:

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Metadata Information
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Metadata information regarding the entities used in the experiments is included in the accompanied metadata. A metadata file per entity category is included in the package. For example, the metadata for all the cell lines that were used in the dataset are included in the Cell_Lines_Metadata.txt file.
Descriptions for each metadata field can be found here: http://www.lincsproject.org/data/data-standards/
